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Commits on Dec 12, 2017

Merge pull request #716 from josemduarte/chainTransformAltlocs
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authored
f18ca28

Commits on Dec 9, 2017

Recursive transform for group
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e0c031b

Commits on Dec 8, 2017

Fixes for translate functions, similar to #715
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8a7e22c
Fixing also Calc.transform(Structure,Matrix4d)
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3a1ad26

Commits on Dec 7, 2017

Fix and unit test for #715
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bc9011a
New demo for mmcif to pdb conversion
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f596afb

Commits on Nov 16, 2017

Better logging
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2898281
Removing almost all warnings in structure module, some logging changes
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bb14709

Commits on Oct 26, 2017

Minor bugfix and some new tests for it
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47ab723

Commits on Oct 18, 2017

Merge pull request #706 from josemduarte/issue704
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87b6be7

Commits on Oct 17, 2017

ignore chains that do not have representative atoms, e.g. 4LKE chain G.
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5a4dce6

Commits on Oct 16, 2017

Merge pull request #710 from josemduarte/issue708
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14f94a7

Commits on Oct 11, 2017

Now identical clustering performed on 95% identical sequences
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730d6b4

Commits on Oct 10, 2017

Better fix for null subunits as advised by @lafita
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96c6816

Commits on Oct 9, 2017

A fix for #708
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276e5cc
Small fix for cloning
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b2555f6

Commits on Oct 7, 2017

several fixes for biological assemblies calculations
$valasatava$ valasatava
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b81c37d

Commits on Oct 5, 2017

A new dome for quat symmetry detection
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8856006

Commits on Oct 4, 2017

New bioassembly demo
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d6c1fb3

Commits on Sep 8, 2017

Commits on Aug 9, 2017

fixed minor issue with lack of this keyword, re-ran tests
$author$
luke czapla
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9a38510
made max values non-static and created final DEFAULT constants
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luke czapla
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361a023
Renamed MaxStagger (etc.) to maxStagger (etc.)
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luke czapla
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0d0ed55
Subclasses not serializable
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luke czapla
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d8a0843

Commits on Aug 6, 2017

Structure object unmarked as transient for serialization
$author$
luke czapla
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8fff10f

Commits on Aug 5, 2017

Merge remote-tracking branch 'upstream/master'
$author$
luke czapla
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ff49ad2

Commits on Jul 31, 2017

getters and setters all have full sentence JavaDoc
$author$
luke czapla
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29ec564
removed added * import
$author$
luke czapla
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077bc2a
Full sentence revision of all JavaDoc and addition of separate error checking method
$luke czapla$ $luke czapla$
luke czapla
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luke czapla
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a182c8d

Commits on Jul 28, 2017

and the other files
$luke czapla$ $luke czapla$
luke czapla
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luke czapla
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4908343
fixed nomenclature for constants
$luke czapla$ $luke czapla$
luke czapla
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luke czapla
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e99cad7
Make the secondary structure objects serializable
$lafita$ lafita
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bc14209

Commits on Jul 27, 2017

JavaDoc
$luke czapla$ $luke czapla$
luke czapla
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luke czapla
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c9a1dd9