Commits

History for

onbiojava-4.2.8

Commits on Jul 5, 2017

Fixing test after remediation
$josemduarte$ josemduarte
committed
42d628d
Updating to latest RCSB URL
$josemduarte$ josemduarte
committed
541b61c

Commits on Nov 23, 2016

Fixed bug: NPE for CrystalBuilder on 4hhb. Moved TestCrystalBuilder to integrationtest.
$josemduarte$ josemduarte
committed
a2f900c

Commits on Nov 22, 2016

Implementing new crystallographic metadata fields.
$josemduarte$ josemduarte
committed
508e770
Implementing parsing of atom_sites category in mmcif parser/consumer
$josemduarte$ josemduarte
committed
ad79f0e

Commits on Jul 13, 2016

Fixing #533
$josemduarte$ josemduarte
committed
2785fdf

Commits on Jun 22, 2016

Introduce @CIFLabel(label="str") annotation
$sbliven$ $josemduarte$
sbliven
authored and
josemduarte
committed
e70dcbb
Fix #480. Correct spelling of _symmetry.space_group_name_H-M in CIF output
$sbliven$ $josemduarte$
sbliven
authored and
josemduarte
committed
19931b5

Commits on Jun 13, 2016

Adapt CeSymm code to new SymmetryAxes API
$lafita$ lafita
committed
5591b2d

Commits on Jun 7, 2016

Fix symmetry axes position bug
$sbliven$ sbliven
committed
58f108c
Add information for construction of full list of symmetry axes.
$sbliven$ sbliven
committed
eef9765

Commits on Jun 6, 2016

Refactor SymmetryAxis class to encapsulate individual axes
$sbliven$ sbliven
committed
87586f6

Commits on Jun 3, 2016

Simplify SymmetryAxis implementation & fix getSymmetryAxes()
$sbliven$ sbliven
committed
3f3a2c5
Adding TestSymmetryAxes prior to refactoring
$sbliven$ sbliven
committed
3d47cf2

Commits on Apr 29, 2016

Added handling of '?' and other non integer string for the charge.
$abradle$ $josemduarte$
abradle
authored and
josemduarte
committed
f24019f
Refactored ChargeAdder and fixed bugs where it wasn't adding charges to all groups.
$abradle$ $josemduarte$
abradle
authored and
josemduarte
committed
22ab7d4

Commits on Apr 11, 2016

Fixing bug in mmcif writing: ins codes were written as ascii code
$josemduarte$ josemduarte
committed
a191165

Commits on Apr 6, 2016

Fix #449 by copying SEQRES to new chains
$sbliven$ sbliven
committed
bfb6a31

Commits on Mar 14, 2016

Fixed a bug where nucleotide bonds were not being generated. Added a test to ensure nucleotide bonds are being generated.
$Anthony Bradley$ $josemduarte$
Anthony Bradley
authored and
josemduarte
committed
98f0f97

Commits on Mar 10, 2016

Light cleanup:
$sbliven$ sbliven
committed
38fbae1
Running spacestotabs on recent changes
$sbliven$ sbliven
committed
5074cb2
Run addlicense
$sbliven$ sbliven
committed
38e327b

Commits on Mar 9, 2016

Merge branch 'master' into removeLoadChemCompInfo
$josemduarte$ josemduarte
committed
d1b5c48
More whitespace fixes
$sbliven$ sbliven
committed
af59f90
Converting initial spaces to tabs.
$sbliven$ sbliven
committed
2417c23
Removing template messages
$sbliven$ sbliven
committed
2bb0271
Remove trailing whitespace globally from .java files
$sbliven$ sbliven
committed
809312e
Running addlicense.sh
$sbliven$ sbliven
committed
f4e725f
Merge branch 'master' into removeLoadChemCompInfo
$josemduarte$ josemduarte
committed
832f106

Commits on Mar 8, 2016

Fixing a few bugs that arose after loadChemCompInfo removal, #426
$josemduarte$ josemduarte
committed
8da9d07
Fix PDBFileParser bug with missing trailing spaces.
$sbliven$ sbliven
committed
1fe46b4
Fixed DBRef#toPDB() method to give 80 characters line
$sroughley$ $sbliven$
sroughley
authored and
sbliven
committed
716780a
Merge branch 'master' into removeLoadChemCompInfo
$josemduarte$ josemduarte
committed
3e808d4
Merge remote-tracking branch 'biojava/master'
$sbliven$ sbliven
committed
e09358e
Honor prefixes for StructureNames
$sbliven$ sbliven
committed
6b3bdb0