Commits

History for

onbiojava-4.2.10

Commits on Dec 8, 2017

Back porting fix and test for #716
$josemduarte$ josemduarte
committed
8f5d03d
Fix and unit test for #715
$josemduarte$ josemduarte
committed
fe8c716

Commits on Oct 19, 2017

Merge pull request #707 from edlunde-dnastar/linelength424
$josemduarte$ josemduarte
authored
58b00ff
Fixing another test problem related to v5
$josemduarte$ josemduarte
committed
5d753fd
Fixing test issues related to v5 and changes in rcsb
$josemduarte$ josemduarte
committed
b840f05

Commits on Oct 18, 2017

Fixing tests after PDB v5 remediation
$josemduarte$ josemduarte
committed
017df86
Changes for CONECT/LINK
$larsonmattr$ larsonmattr
committed
e88637c

Commits on Jul 13, 2017

Fixing test after case change in RCSB rest service
$josemduarte$ josemduarte
committed
a24e23e

Commits on Jul 5, 2017

Fixing test after remediation
$josemduarte$ josemduarte
committed
42d628d
Updating to latest RCSB URL
$josemduarte$ josemduarte
committed
541b61c

Commits on Nov 30, 2016

Added exception handler for out-of-bounds errors when parsing lines, usually indicative of misformated lines.
$author$
Matt Larson
committed
50c34d3

Commits on Nov 23, 2016

Fixed bug: NPE for CrystalBuilder on 4hhb. Moved TestCrystalBuilder to integrationtest.
$josemduarte$ josemduarte
committed
a2f900c

Commits on Nov 22, 2016

Commits on Jul 13, 2016

Fixing #533
$josemduarte$ josemduarte
committed
2785fdf

Commits on Jun 22, 2016

Introduce @CIFLabel(label="str") annotation
$sbliven$ $josemduarte$
sbliven
authored and
josemduarte
committed
e70dcbb
Fix #480. Correct spelling of _symmetry.space_group_name_H-M in CIF output
$sbliven$ $josemduarte$
sbliven
authored and
josemduarte
committed
19931b5

Commits on Jun 13, 2016

Adapt CeSymm code to new SymmetryAxes API
$lafita$ lafita
committed
5591b2d

Commits on Jun 7, 2016

Fix symmetry axes position bug
$sbliven$ sbliven
committed
58f108c
Add information for construction of full list of symmetry axes.
$sbliven$ sbliven
committed
eef9765

Commits on Jun 6, 2016

Refactor SymmetryAxis class to encapsulate individual axes
$sbliven$ sbliven
committed
87586f6

Commits on Jun 3, 2016

Simplify SymmetryAxis implementation & fix getSymmetryAxes()
$sbliven$ sbliven
committed
3f3a2c5
Adding TestSymmetryAxes prior to refactoring
$sbliven$ sbliven
committed
3d47cf2

Commits on Apr 29, 2016

Added handling of '?' and other non integer string for the charge.
$abradle$ $josemduarte$
abradle
authored and
josemduarte
committed
f24019f
Refactored ChargeAdder and fixed bugs where it wasn't adding charges to all groups.
$abradle$ $josemduarte$
abradle
authored and
josemduarte
committed
22ab7d4

Commits on Apr 11, 2016

Fixing bug in mmcif writing: ins codes were written as ascii code
$josemduarte$ josemduarte
committed
a191165

Commits on Apr 6, 2016

Fix #449 by copying SEQRES to new chains
$sbliven$ sbliven
committed
bfb6a31

Commits on Mar 14, 2016

Fixed a bug where nucleotide bonds were not being generated. Added a test to ensure nucleotide bonds are being generated.
$Anthony Bradley$ $josemduarte$
Anthony Bradley
authored and
josemduarte
committed
98f0f97

Commits on Mar 10, 2016

Light cleanup:
$sbliven$ sbliven
committed
38fbae1
Running spacestotabs on recent changes
$sbliven$ sbliven
committed
5074cb2
Run addlicense
$sbliven$ sbliven
committed
38e327b

Commits on Mar 9, 2016