Commits

History for

onbiojava-4.2.8

Commits on Mar 10, 2016

Light cleanup:
$sbliven$ sbliven
committed
38fbae1
Running spacestotabs on recent changes
$sbliven$ sbliven
committed
5074cb2

Commits on Mar 9, 2016

Commits on Mar 8, 2016

Removing loadChemCompInfo, some tests don't pass yet
$josemduarte$ josemduarte
committed
0a68908

Commits on Feb 1, 2016

Merge branch 'master' into cesymm
$lafita$ lafita
committed
9b1d123

Commits on Jan 26, 2016

Merge branch 'master' into cesymm
$lafita$ lafita
committed
41edf6a
#383 updating of demo scripts to new StructureIdentifier convention
$andreasprlic$ andreasprlic
committed
aea237a

Commits on Jan 25, 2016

Make CeSymm static class
$lafita$ lafita
committed
abcb559
Update demo because of StructureIdentifier
$lafita$ lafita
committed
35102f5

Commits on Jan 8, 2016

#360 improving class and method names
$andreasprlic$ andreasprlic
committed
d4597c4

Commits on Dec 1, 2015

Adding biojava license statements
$sbliven$ sbliven
committed
dbe75e4

Commits on Nov 30, 2015

Set the default minimum SSE per subunit to 2
$lafita$ lafita
committed
a34c8e1
Add and update CESymmParameters
$lafita$ lafita
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f85b5b4
Format and improve SS support
$lafita$ lafita
committed
aeb2344

Commits on Oct 19, 2015

Implement new output printing methods for SS
$lafita$ lafita
committed
bb4bc34
New Demo on how to use the DSSP implementation
$lafita$ lafita
committed
5365d3d
Update DemoLoadSecStruc with new features
$lafita$ lafita
committed
c5edbcb

Commits on Oct 5, 2015

Decouple SS annotation from AminoAcid interface
$lafita$ lafita
committed
216a166

Commits on Sep 30, 2015

Include the random coil annotation in SS parsing
$lafita$ lafita
committed
4788b71

Commits on Sep 29, 2015

Modify the API for SS parsing and storage
$lafita$ lafita
committed
02a7a6e

Commits on Sep 16, 2015

adding support for parsing sequence mismatched into Chain class
$andreasprlic$ andreasprlic
committed
589e3cb

Commits on Aug 11, 2015

Add demo for point group internal symmetry calculation
$lafita$ lafita
committed
3e3866b

Commits on Aug 7, 2015

Unimplement StructureAlignment in CeSymm
$lafita$ lafita
committed
fb4e53d

Commits on Aug 4, 2015

Allow non-refined result, only self-alignment
$lafita$ lafita
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6beb849
Fix demo issues
$lafita$ lafita
committed
90b4403

Commits on Aug 3, 2015

Add Demo for CeSymm
$lafita$ lafita
committed
e5cfa6b

Commits on Jul 24, 2015

Fix bug with flexible MultipleAlignments
$lafita$ lafita
committed
c9ba6d1

Commits on Jul 16, 2015

Organize MultipleAlignment code in a util package
$lafita$ lafita
committed
488d071

Commits on Jul 8, 2015

Implement XML Converter and Parser for MultipleAlignments
$lafita$ lafita
committed
486af17

Commits on Jul 7, 2015

Add more examples for the MultipleAlignment algorithm
$lafita$ lafita
committed
20010a5

Commits on Jul 1, 2015

Create Multiple Alignment GUI
$lafita$ lafita
committed
2fa9ca2

Commits on Jun 25, 2015

Clean Demos for Multiple Alignments
$lafita$ lafita
committed
c565bf1