Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
Accelerator
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Search
/
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
Uh oh!
There was an error while loading.
Please reload this page
.
ws-java
/
biojava
Public
forked from
biojava/biojava
Notifications
You must be signed in to change notification settings
Fork
0
Star
0
Code
Pull requests
0
Actions
Projects
Security and quality
0
Insights
Additional navigation options
Code
Pull requests
Actions
Projects
Security and quality
Insights
Commits
Branch selector
biojava-4.2.8
User selector
All users
Datepicker
All time
Commit history
Commits on Jul 6, 2017
[maven-release-plugin] prepare release biojava-4.2.8
josemduarte
committed
dee8b41
View commit details
Copy full SHA for dee8b41
Browse repository at this point
Fix for pom needed for release to be performed
josemduarte
committed
d7d7a28
View commit details
Copy full SHA for d7d7a28
Browse repository at this point
[maven-release-plugin] rollback the release of biojava-4.2.8
josemduarte
committed
7c802e0
View commit details
Copy full SHA for 7c802e0
Browse repository at this point
[maven-release-plugin] prepare for next development iteration
josemduarte
committed
f7f5eec
View commit details
Copy full SHA for f7f5eec
Browse repository at this point
[maven-release-plugin] prepare release biojava-4.2.8
josemduarte
committed
9fb8fcc
View commit details
Copy full SHA for 9fb8fcc
Browse repository at this point
Merge pull request #682 from valasatava/bugfixes-4.2
Show description for 1653b63
josemduarte
authored
1653b63
View commit details
Copy full SHA for 1653b63
Browse repository at this point
Merge pull request #683 from josemduarte/bugfixes-4.2
Show description for 9291fab
josemduarte
authored
9291fab
View commit details
Copy full SHA for 9291fab
Browse repository at this point
Better http than https
josemduarte
committed
a38c8c8
View commit details
Copy full SHA for a38c8c8
Browse repository at this point
Updating ligand URLs to latest RCSB convention
josemduarte
committed
dc7f3ea
View commit details
Copy full SHA for dc7f3ea
Browse repository at this point
Commits on Jul 5, 2017
Fixing test after remediation
josemduarte
committed
42d628d
View commit details
Copy full SHA for 42d628d
Browse repository at this point
Updating to latest RCSB URL
josemduarte
committed
541b61c
View commit details
Copy full SHA for 541b61c
Browse repository at this point
Updating dssp urls to latest RCSB convention
josemduarte
committed
4bdd304
View commit details
Copy full SHA for 4bdd304
Browse repository at this point
Adding missing methods to the interface
valasatava
committed
450b43c
View commit details
Copy full SHA for 450b43c
Browse repository at this point
Cherry-pick the c5fa135 commit
valasatava
committed
a3edf54
View commit details
Copy full SHA for a3edf54
Browse repository at this point
Commits on Mar 8, 2017
[maven-release-plugin]prepare for next development iteration
Jenkins
committed
714649c
View commit details
Copy full SHA for 714649c
Browse repository at this point
[maven-release-plugin]prepare release biojava-4.2.7
Jenkins
committed
b369f5f
View commit details
Copy full SHA for b369f5f
Browse repository at this point
Commits on Mar 7, 2017
Chromosome mapping tool: unit test to check handling multiple UTRs preceding the coding region
Yana Valasatava
authored and
josemduarte
committed
55639ac
View commit details
Copy full SHA for 55639ac
Browse repository at this point
Unit tests for converting a genomic position to the position on mRNA for the genes leaving on the forward strand
Yana Valasatava
authored and
josemduarte
committed
73b56c3
View commit details
Copy full SHA for 73b56c3
Browse repository at this point
Chromosome mapping tool patch for converting a genomic position to the position on mRNA for the genes leaving on the forward strand
Yana Valasatava
authored and
josemduarte
committed
4e292b4
View commit details
Copy full SHA for 4e292b4
Browse repository at this point
Bugfix: chromosome mapping tool returns -1 if position falls outside coding region on the forward strand
Yana Valasatava
authored and
josemduarte
committed
331ac26
View commit details
Copy full SHA for 331ac26
Browse repository at this point
Commits on Mar 2, 2017
Merge pull request #640 from josemduarte/bugfixes-4.2
Show description for c5fea44
andreasprlic
authored
c5fea44
View commit details
Copy full SHA for c5fea44
Browse repository at this point
Bugfix: header was wrongly specified. Better error handling
josemduarte
committed
eee49af
View commit details
Copy full SHA for eee49af
Browse repository at this point
Commits on Feb 18, 2017
[maven-release-plugin]prepare for next development iteration
Jenkins
committed
2888f8f
View commit details
Copy full SHA for 2888f8f
Browse repository at this point
[maven-release-plugin]prepare release biojava-4.2.6
Jenkins
committed
6624619
View commit details
Copy full SHA for 6624619
Browse repository at this point
Catching empty coordinates earlier in quat sym detection
josemduarte
committed
0f322ee
View commit details
Copy full SHA for 0f322ee
Browse repository at this point
Commits on Feb 15, 2017
Merge pull request #634 from sbliven/bugfixes-4.2
Show description for 50fa989
sbliven
authored
50fa989
View commit details
Copy full SHA for 50fa989
Browse repository at this point
Fix Quaternary symmetry symmetry detection bug
Show description for ac19532
sbliven
committed
ac19532
View commit details
Copy full SHA for ac19532
Browse repository at this point
Commits on Feb 10, 2017
Better rules for Quaternary symm self-alignments
Show description for 89ac11a
sbliven
committed
89ac11a
View commit details
Copy full SHA for 89ac11a
Browse repository at this point
Commits on Jan 21, 2017
Now catching empty arrays in getCentroid
josemduarte
committed
feb9852
View commit details
Copy full SHA for feb9852
Browse repository at this point
Less verbose logging in AsaCalculator
josemduarte
committed
c11c0d2
View commit details
Copy full SHA for c11c0d2
Browse repository at this point
Better logging in symmetry package
josemduarte
committed
7f8659a
View commit details
Copy full SHA for 7f8659a
Browse repository at this point
Fix for #631
josemduarte
committed
afd6fcb
View commit details
Copy full SHA for afd6fcb
Browse repository at this point
New test to demonstrate issue with cloning
josemduarte
committed
0d07e69
View commit details
Copy full SHA for 0d07e69
Browse repository at this point
Commits on Dec 7, 2016
[maven-release-plugin]prepare for next development iteration
Jenkins
committed
2a6ff38
View commit details
Copy full SHA for 2a6ff38
Browse repository at this point
[maven-release-plugin]prepare release biojava-4.2.5
Jenkins
committed
4db2832
View commit details
Copy full SHA for 4db2832
Browse repository at this point
Previous
Next
You can’t perform that action at this time.